Wang, Y., Jiang, Z., Wang, Y., Liu, Z., Liang P., Rastogi, N., Cai, H., Sun, Q. TB-DROP: Deep learning-based drug resistance prediction of Mycobacterium tuberculosis utilizing the whole genome mutations. BMC Genomic. 2024. 25:167. https://doi.org/10.1186/s12864-024-10066-y
Zhou, Z., Wang, D., Luo, D., Zhou, Z., Liu, W., Zeng, W., Dinnyes, A., Xiong, Y., Sun, Q. Non-covalent binding of chlorogenic acid to myofibrillar protein improved its bio-functionality properties and metabolic fate. Food Chemistry. 2024. 440:138208. https://doi.org/10.1016/j.foodchem.2023.138208
Yu, Y., Zhou, Z., Jin, Y., Zhou, Z., Shi, J., Fu, Y, Luo, X., Li, H., Suman, S.P., Guan, J., Sun, Q. Carcass characteristics and meat quality attributes of cattleyak in Tibet Plateau, Food Science of Animal Products. 2023. 1(3):9240027. https://doiorg/10 26599/FSAP2023.9240027
Naim, M.L., Fu, Y., Shagan, M., Bar-Or, I., Marks, R., Sun, Q., Granek, R., Kushmaro, A. The rise and fall of Omicron BA.1 variant as seen in wastewater. Virus. 2023. 15:1862. https://doi.org/10.3390/v15091862
Zhang, A., Ma, Yu., Deng, Y., Zhou, Z., Cao, Y., Yang, B., Bai, J., Sun, Q. Enhancing protease and amylase activities in Bacillus licheniformis XS-4 for traditional soy sauce fermentation using ARTP mutagenesis. Foods. 2023. 12:2381. https://doi.org/10.3390/foods12122381
Baruch, Y., Golberg, K., Sun, Q., Gin Y-H Karina, Marks, R., Kushmaro, A. 3,3’-Diindolylmethane (DIM): a potential therapeutic agent against cariogenic Streptococcus mutans biofilm. Antibiotics. 2023. 12: 1017. https://doi.org/10.3390/antibiotics12061017
Zhou, Z., Xu, X., Luo, D., Zhou, Z., Zhang, S., He, R., An, T., Sun, Q. Effect of dietary supplementation of Lactiplantibacillus plantarum N-1 and its synergies with oligomeric isomaltose on the growth performance and meat quality in Hu Sheep. Foods. 2023. 12:1858. https://doi.org/10.3390/foods12091858
Zhou, Z., Luo, D., Li, M., Lao, G., Zhou, Z., Dinnyes, A., Xu, W., Sun, Q. A novel multicellular placental barrier model to investigate the effect of maternal aflatoxin B1 exposure on fetal neurodevelopment. Toxin. 2023. 15:312. https://doi.org/10.3390/toxins15050312
Tian, L, Luo, D., Li, R., Jiao, P., Zhou, Z., Liu, R., Zhou, Z., Marks, R.S., Sun, Q. The metabolic mechanism of growth inhibition by co-culture of Bacteroides xylanisolvens Y-11 and Bifidobacterium longum y37. Eurobiotechnology Journal. 2023. 7(2):121-131.
Qiu, Z., Luo, D., Yin, H., Chen, Y., Zhou, Zo, Zhang, J., Zhang, L., Xia, J., Xie, J., Sun, Q., Xu, W. Lactiplantibacillus plantarum N-1 improves autism-like behavior and gut microbiota in mouse. Frontier in Microbiology. 2023. 14:1134517. doi: 10.3389/fmicb.2023.1134517. (Co-corresponding author)
Zhu, T., Zeng, Q., Zhao, C., Wen, Y., Li, S., Li, F., Lan, T. Yang, Y., Liu, N., Sun, Q., Liao, J. Extracellular biomineralization of uranium and its toxicity alleviation to Bacillus thuringiensis X-27. Journal of Environmental Radioactivity. 2023. 261:107126
Zhou, Z., Wang, D., Xu, X., Dai, J., Lao, G., Zhang, S., Xu, X., Dinnyes, A., Xiong, Y.L., Sun, Q. Myofibrillar protein-chlorogenic acid complexes ameliorate glucose metabolism via modulating gut microbiota in a type 2 diabetic rat model. Food Chemistry. 2023. https://doi.org/10.1016/j.foodchem.2022.135195
Wu S., Li X., Li P., Li T., Huang G, Sun Q., Dinnyés A, Shang L., Xu W.. Developing rat testicular organoid models for assessing the reproductive toxicity of antidepression drugs in vitro. Acta Biochim Biophys Sin (Shanghai). 2022. 54(11):1748-1752. doi: 10.3724/abbs.2022164.
Liu, Z., Jiang, Z., Wu, W., Xu, X., Ma, Y., Guo, X., Zhang, S., Sun, Q. Identification of region of difference and H37Rv-related deletion in Mycobacterium tuberculosis complex by structural variant detection and genome assembly. Frontier in Microbiology. 2022. https://doi.org/10.3389/fmicb.2022.984582
Fu, Y., Tan, H., Wang, B., Peng, W., Sun, Q., Yu, Y. Metabolomics reveals dopa melanin involved in the enzymatic browning of the yellow cultivars of East Asian golden needle mushroom (Flammulina filiformis). Postharvest Biology and Technology. 2023. 195. https://doi.org/10.1016/j.postharvbio.2022.112111 (Co-corresponding author)
Tian, L, Zhao, R., Xu, X., Zhou, Z. Xu, X., Luo, D., Zhou, Z., Liu, Y., Kushmaro, A., Marks, R., Dinnyes, A., Sun, Q. Modulatory effects of Lactiplantibacillus plantarum on chronic metabolic diseases. 2022. Food Science and Human Wellness. https://doi.org/10.1007/s12602-021-09886-1
Xu, X., Jia, Y., Li, R., Wen, Y., Liang, Y., Lao, Go., Liu, X., Zhou, W., Liu, H., Xie, J., Wang, X., Xu, W., Sun, Q. Rapid and simultaneous detection of multiple pathogens in the lower reproductive tract during pregnancy based on loop-mediated isothermal amplification-microfluidic chip. BMC Microbiology. 2022. 22:260. https://doi.org/10.1186/s12866-022-02657-0
He, W., Chen, N., Yu, Z., Sun, Q., Zeng, W. Effect of tea polyphenols on the quality of Chinese steamed bun and the action mechanism. Journal of Food Science, 2022. 87(4): 1500-1513.
He, W., Chen, N., Yu, Z., Sun, Q., He, Q., Zeng, W. Effect of structure complexity of catechins on the properties of glutenin: the rule, action mechanism and application. Food Biophysics, 2022. 17(04):586-597.
Chen, L., Chen, N., He, Q., Sun, Q., Zeng, W. Effects of casein on the stability, antioxidant activity and bioavailability of lotus anthocyanins. Journal of Food Biochemistry, 2022. 46(10): e14288.
Chen, L., Chen, N., He, Q., Sun, Q., Zeng, W. Effects of different phenolic compounds on the interfacial behaviour of casein and the action mechanism. Food Research International, 2022, 162, 112110.
Tan C., Xu, Q., Chen, N., He, Q., Sun, Q., Yu, Z., Zeng, W. Cross-linking effects of EGCG on myofibrillar protein from common carp (Cyprinus carpio) and the action mechanism. Food Research International. Journal of Food Processing and Preservation, 2022. 46(05): e16521.
He, W., Chen, N., Yu, Z., Sun, Q., He, Q., Zeng, W. Gliadin interacted with tea polyphenols: potential application and action mechanism. International Journal of Food Sciences and Nutrition, 2022. 73(06): 786-799.
Wei, Z., Shu, D., Chen, D., Li, Z., Luo, D., Sun, Q. Yang, J., Tan, H. The BcLAE1 is involved in the regulation of ABA biosynthesis in Botrytis cinerea TB-31. Frontier in Microbiology. 2022. http://doi/10.3389/fmicb.2022.969499
Zhang, Z., Yang, Y. Sun, Q., Zeng, W., Li, Y. Inhibition of biofilm formation and virulence factors of cariogenic oral pathogen Streptococcus mutans by shikimic acid. Microbiology Spectrum. 2022. http://doi/10.1128/spectrum.01199-22
Ma, Q., Pan, Y., Chen, Y., Yu, S., Huang, J., Liu, Y., Gong, T., Zhang, Q., Sun, Q., Zou, J., Li, Y. Acetylation of lactate dehydrogenase negatively regulates the acidogenicity of Streptococcus mutans. 2022. mBio. http://doi.org/10.1128/mbio.02013-22
Zhang, S., Sun, H., Lao, G., Zhou, Z., Liu, Z., Cai, J., Sun, Q. Identification of mobile colistin resistance gene mcr-10 in disinfectant and antibiotic resistant Escherichia coli from disinfected tableware. 2022. Antibiotics. 11: 883. https://doi.org/10.3390/antibiotics11070883 (Q1, IF 5.222)
Zhou, Z., Wang, D., Liu, W., Lang, H, Liang, P., Hao, J., Sun, Q. The immunity-promoting activity of porcine placenta in mice as an immunomodulator in functional foods. 2022. Food Science and Human Wellness. 11: 1475-1481
Zhang, H., Guo, X., Tian, L., Wang, N., Li, Y., Kushmaro, A., Marks, R., Sun, Q. Antibiofilm activity of 3,3’-diindolylmethane on Staphylococcus aureus and its disinfection on common food-contact surfaces. Food Science and Human Wellness. 2022. 11: 1222-1232.
Tian, L, Liu, Y., Xu, X., Jiao, P., Hu, G., Cui, Y., Chen, J., Ma, Y., Jin, X., Wang, K., Sun, Q. Lactiplantibacillus plantarum J-15 reduced calcium oxalate kidney stones by regulating intestinal microbiota, metabolism and inflammation in rats. FASEB Journal. 2022. DOI: 10.1096/fj.202101972RR (Q1, IF 5.191)
Lin, Y., Gong, T., Ma, Q., Jing, M., Zheng, T., Yan, J., Chen, J., Pan Y., Sun, Q., Zhou, X., Li, Y. Nicotinamide could reduce growth and cariogenic virulence of Streptococcus mutans. Journal of Oral Microbiology. 2022. https://doi.org/10.1080/20002297.2022.2056291
Jiang, M, Yang, C., Kwan, P.S., Zhang, L., Fan, H., Jin, Y., Sun, L., Chen, H., Li, B., Chen, Q., Wu, Y., Guo, Y., Shi, Y., Liao, M., Shi, X., Cai, R., Deng, Y., Sun, Q., Yang, R., Zhang, Q., Cui, Y., Hu, Q. Rapid multilateral and integrated public health response to a cross-city outbreak of Salmonella enteritidis infections combining analytical, molecular and genomic epidemiological analysis. Frontier in Microbiology. 2022. doi: 10.3389/fmicb.2022.77248
Xu, Q., Zhou, Z., Y., He, Q., Sun, Q., Zeng, W. Effect of tea polyphenols on the quality of Chinese steamed bun and the Cedrus deodara extract on the physiochemical and sensory properties of salted meat and its action mechanism. Journal of Food Science. 2021. DOI: 10.1111/jfpp.15396.
Jiang, Z., Lu, Y., Liu, Z., Wu, W., Xu, X, Yu, Z., Chen, L. Dinnyes, A., Sun, Q. Drug resistance prediction and resistance genes identification in Mycobacterium tuberculosis based on a hierarchical attentive neural network utilizing genome-wide variants. Briefings In Bioinformatics. 2022. https://doi.org/10.1093/bib/bbac041 (Q1, IF 13.994)
Tian, L, Liu, R., Zhou, Z., Xu, X., Feng, S., Kushmaro, A., Marks, R.S., Wang, D., Sun, Q. Probiotic characteristics of Lactiplantibacillus plantarum N‑1 and its cholesterol‑lowering effect in hypercholesterolemic rats. Probiotics and Antimicrobial Proteins. 2022. https://doi.org/10.1007/s12602-021-09886-1
Zhou, Z., Xu, Q., Chen, L., Chen, N., Gao, H., Sun, Q., Zeng, W. Interaction and action mechanism of quercetin and myofibrillar protein and its effects on the quality of cured meat. Journal of Food Processing and Preservation. 2021. DOI: 10.1111/jfpp.16020.
Fu, Y., Yu, W., Lin, W., Yu, Y., Duan, C., Cai, H., Sun, Q. A novel non-destructive detection of moldy/wormy dried longan fruits based on low field nuclear magnetic resonance using machine learning algorithms. Food Measurement and Characterization. 2021. https://doi.org/10.1007/s11694-021-01190-4
Fu, Y., Yu, Y., Tan, H., Wang, B., Peng, W., Sun, Q. Metabolomics reveals dopa melanin involved in the enzymatic browning of the yellow cultivars of East Asian golden needle mushroom (Flammulina filiformis). Food Chemistry. 2022. 370:131295. https://doi.org/10.1016/j.foodchem.2021.131295
Wei, Z., Cui, Y., Tian, L., Liu, Y., Yu, Y., Jin, X., Li, H.m, Wang, K., Sun, Q. Probiotics Lactobacillus plantarum N-1 prevents ethylene glycol-induced kidney stones by regulating gut microbiota and enhancing intestinal barrier function. 2021. FASEB Journal. DOI: 10.1096/fj.202100887RR. (Q1, IF 5.19)
Liu, Y, Jin, X., Tian, L., Jian, Z, Ma, Y., Cheng, L., Cui, Y., Li, H., Sun, Q., Wang, K. Lactiplantibacillus plantarum reduced renal calcium oxalate stones by regulating arginine metabolism in gut microbiota. Frontiers in Microbiology. 2021. doi: 10.3389/fmicb.2021.743097 (Q1, IF 5.64)
Guo., X., Qiao, M., Yang, Y., Luo, K., Liu, Z., Liu, J., Kuznetsova N., Liu, Z., Sun, Q. Bacillus amyloliquefaciens M73 reduces postharvest decay and promotes anthocyanin accumulation in Tarocco blood orange (Citrus sinensis (L.) Osbeck) during cold storage. 2021. Postharvest Biology and Technology, https://doi.org/10.1016/j.postharvbio.2021.111698 (Q1, IF 5.54)
Chen, L., Yi, Z., Fang, Y., Jin, Y., He, K., Xiao, Y., Zhao, D., Luo, H., He, H., Sun, Q., Zhao, H. Biochemical and synergistic properties of a novel alpha-amylase from Chinese Nong-flavor Daqu. 2021. Microbial Cell Factories, 20:80. https://doi.org/10.1016/j.enzmictec.2020.109672
Liu, Y., Li, Z., Wang, S., Zhang, C., Han, L., Sun, Q., Han, X. Aspergillus fumigatus induces the release of IL‑8 and MCP‑1 by activating nuclear transcription through Dectin‑1 and CR3 receptors in alveolar epithelial cells. Current Microbiology. 2021. https://doi.org/10.1007/s00284-021-02534-5
Liu, J., Zhang, H., Cao, Y., Sun, Q. First Report of postharvest fruit rot disease of hardy kiwifruit caused by Diaporthe eres in China. Plant Disease. 2021. https://doi.org/10.1094/PDIS-08-20-1705-PDN (Q1, IF 4.44)
Xu, Q., Zhou, Z., Y., He, Q., Sun, Q., Zeng, W. Effect of Cedrus deodara extract on the physiochemical and sensory properties of salted meat and its action mechanism. Journal of Food Science. 2021. DOI: 10.1111/jfpp.15396.
Xu, Q., Zhou, Z., Jing, Z., He, Q., Sun, Q., Zeng, W. Pine needle extract from Cedrus deodara: Potential applications on hazardous chemicals and quality of smoked bacon and its mechanism. Food Control. 2021. https://doi.org/10.1016/j.foodcont.2021.108368
Chen, L., Li, Z, He, Q., Gao, M., Sun, Q., Zeng, W. Effect of lotus (Nelumbo nucifera) petals extract on the quality of yogurt and its action mechanism. Journal of Food Processing and Preservation. 2021. DOI: 10.1111/jfpp.15396.
Chen, L., Chen, N., He, Q., Sun, Q., Zeng, W. Preparation of a functional yogurt with Ligustrum robustum (Rxob.) Blume and its action mechanism. Journal of Food Science 2021, 86(3): 1114-1123.
Wang, X., Li, M., Zhang, X., Li, Y., He, G., Dinnyes, A., Sun, Q., Xu, W. CYP11A1 upregulation leads to trophoblast oxidative stress and fetal neurodevelopmental toxicity that can be rescued by vitamin D. Frontiers in Molecular Bioscience. 2021. doi: 10.3389/fmolb.2020.608447.
Deng, Y., Jiang, M, Kwan, P.S.L, Yang, C., Chen, Q., Lin, Y. Qiu, Y, Li, Y., Shi, X., Li, L, Cui, Y., Sun, Q., Hu, Q. Integrated genomic surveillance infrastructure for outbreak detection of Salmonella enteric serotype Enteritidis. Foodborne Pathogen and Disease. 2021. DOI: 10.1089/fpd.2020.2856
Wang, Y., Li, J, Zhou, Z., Zhou, R., Sun, Q., Wu, P. Halo-fluorescein for photodynamic bacteria inactivation in extremely acidic conditions. Nature Communication. 2021. https://doi.org/10.1038/s41467-020-20869-8
Liang, P., Zheng, C., Xu, X., Zhao, Z-Z, Zhao, C., Li, C., Couvin, D., Reynaud, Y., Zozio, T., Li, S., Luo, D., Rastog, N., Sun, Q. Local adaptive evolution of two distinct clades of Beijing and T families of Mycobacterium tuberculosis in Chongqing: a Bayesian population structure and phylogenetic study. Infectious Diseases of Poverty. 2020. https://doi.org/10.1186/s40249-020-00674-7
Qu, R., Sun, Q., Wei, Y., Deng, P., Hou, X. Quantification of 13C, 15N labelled compounds with 13C, 15N edited 1H Nuclear Magnetic Resonance spectroscopy. Talanta, 2020. Talanta,https://doi.org/10.1016/j.talanta.2020.121839
Liu, Y., Jin, X., Hong, H.G., Xiang, L., Jiang, Q., Ma, Y., Chen, Z., Cheng, L., Jian, Z., Wei, Z., Ai, J., Qi, S., Sun, Q., Li, H., Li, Y., and Wang, K. The relationship between gut microbiota and short chain fatty acids in the renal calcium oxalate stones disease. 2020. FASEB Journal. DOI: 10.2139/ssrn.3566113
Chen, L., Yi, Z., Fang, Y., Jin, Y., Xiao, Y., Zhao, D., Luo, H., He, H., Sun, Q., Zhao, H. Uncovering key residues responsible for the thermostability of a thermophilic 1,3(4)-β-D-glucanase from Nong flavor Daqu by rational design. Enzyme and Microbial Technology. 2020, https://doi.org/10.1016/j.enzmictec.2020.109672
Yu, Y., Shi, J., Xie, B., He, Y., Wang, D., Shi, H., Ke, Y., Sun, Q. Detoxification of aflatoxin B1 in corn by chlorine dioxide gas. Food Chemistry. 2020. 328:127121
Zhang, G., Lu, M., Liu, R, Tian, Y., Vu, V-H., Li, Y. Liu, B., Kuhmaro, A. , Li, Y., Sun, Q. Inhibition of Streptococcus mutans biofilm formation and virulence by Lactobacillus plantarum K41 isolated from traditional Sichuan pickles. Frontiers in Microbiology. 2020. 11(4); doi: 10.3389/fmicb.2020.00774.
Wang, Y., Yu, Y., Huang, M., Gao, P., Chen, H., Liu, M., Chen, Q., Yang, Z., Sun, Q. Transcriptomic and proteomic profiles of II YOU 838 (Oryza sativa) provide insights into heat stress tolerance in hybrid rice. PeerJ. 2020, 8:e8306 DOI 10.7717/peerj.8306
Shi, H., Yu, Y., Gu, R., Feng, C., Yu, X., Yuan, J., Sun, Q., Ke, Y. Male sterile 305 mutation leads the misregulation of anther cuticle formation by disrupting lipid metabolism in maize. International Journal of Molecular Sciences. 2020. 21, 2500; doi:10.3390/ijms21072500
Gao, H., He, Z., Sun, Q., He, Q., Zeng, W. A functional polysaccharide film forming by pectin, chitosan, and tea polyphenols. Carbohydrate Polymers, 2019, 215: 1-7.
Bourguignon, A., Kobolak, J., Janstova, Z., Tun, Z, Feher, A., Sun, Q., Xu, W., Dinnyes, A. Pluripotent stem cell-based technology platform for improved understanding of developmental toxicology and DOHaD. The Thai Journal of Veterinary Medicine, 2019, 49 (S2): 96-98.
Gao, M., Xu, Q., He, Q., Sun, Q., Zeng, W. A theoretical and experimental study: the influence of different standards on the determination of total phenol content in the Folin–Ciocalteu assay. Journal of Food Measurement and Characterization. 2019, 13:1349-1356.
Zhao, C., Liu, J., Deng, Y., Tian, Y., Zhang, G., Liao, J., Yang, J., Yang, Y., Liu, N., Sun, Q. Microorganism-graphene oxide composites via an immobilization approach for uranium(Ⅵ) adsorption from aqueous solutions. Journal of Cleaner Production. 2019, 236: 117624. (IF 6.395)
Zhang, G., Li, X., Xu, X., Tang, K., Vu, V-H., Gao, P., Chen, H., Sun, Q. Antimicrobial activity of irradiation-degraded chitosan fragments. Food Bioscience. 2019, 29: 94-101
Wen, W., Liu, R., Guan, J., Zhou, Z., Luo, X., Summan, S.P., Sun, Q. Skeletal muscle proteome analysis provides insights on high altitude adaptation of yaks. Molecular Biology Reports. 2019, https://doi.org/10.1007/s11033-019-04732-8.
Vu, V-H, Li, X., Wang, M., Liu, R., Zhang, G., Liu, W., Xia, B., Sun, Q. Effects of salt-sugar additives on silage quality of elephant grass (Pennisetum purpureum) produced in northern Vietnam. Asian-Australasian Journal of Animal Sciences. 2019, 32(7): 996-1006
