胡泉军

个人简历

基本信息

胡泉军，博士，男，汉族

职称：副教授，博士生导师

邮件：huquanjun@scu.edu.cn, huquanjun@gmail.com

通讯地址：四川省成都市武侯区beat365手机官方网站

教育和工作经历

2016年至今：beat365手机官方网站，副教授

2014 - 2016： beat365手机官方网站，博士后

2009 - 2014： 兰州大学beat365手机官方网站，博士学位

2005 - 2009： 兰州大学信息科学与工程学院，学士学位

研究方向：植物分子生态学，以龙胆科与十字花科植物为研究对象，基于基因组、转录组、代谢组等数据，开展极端环境适应性与物种多样性形成机制的研究。

研究内容

生物进化中的物种多样性是人类社会赖以生存和发展的基础之一，课题组围绕物种多样性形成机制，利用基因组及群体基因组等多种分析方法，解析物种多样化过程中的多倍化和杂交历史，阐明这些进化事件对物种的环境适应和多样化的影响。在PNAS、Cell Research、Molecular Ecology、Molecular Ecology Resource、Horticulture Research、Molecular Plant、National Science Review、DNA Research、BMC Genomics 等刊物上以通讯联系人（含共同）和第一作者（含并列）发表20多篇研究论文。担任BMC Genomics编委。

本科和研究生教学

主讲《生物学计算机编程语言》、《计算生物学研究训练》，参讲《组学》等本科课程。

主讲《高级组学分析》，参讲《保护生物学》等研究生课程

主持和参与的主要科研项目：

国家自然科学基金面上项目（32171606）：青藏高原龙胆科秦艽组适应性辐射物种多样化的群体基因组研究, 2022至 2025, 主持

国家自然科学基金面上项目（41771055）：双果荠属基因组生物地理学研究：响应气候变化的物种分化和种群变化，2018至2021，主持

国家自然科学基金青年项目（31700323）， 利用简化基因组研究麻花艽和管花秦艽的基因流动态历史，2018至2020，主持

科技部科技基础资源调查专项课题（2017FY100100）子任务, 中国西南地区极小种群野生植物调查与种质保存, 2017至 2022, 主持

国家自然科学基金重点项目（32030006）, 拟南芥西藏生态型的适应性演化研究, 2021至 2025, 参与

国家自然科学基金面上项目（31870244）, 拟南芥UIE-UVS1-FHY3功能模块参与紫外光信号通路的分子机制, 2019 至 2022, 参与

代表性论文如下（*为通讯作者，#为共同第一作者）：

Meng Xiao#, Guoqian Hao#, Xinyi Guo, Landi Feng, Hao Lin, Wenjie Yang, Yanyu Chen, Kexin Zhao, Ling Xiang, Jiang Xinyao, Dong Mei and Quanjun Hu*. A high-quality chromosome-level Eutrema salsugineum genome, an extremophile plant model. BMC Genomics, 24:174 (2023).

Yazhen Ma#, Xingxing Mao#, Ji Wang#, Lei Zhang, Yuanzhong Jiang, Yuying Geng, TaoMa, Liming Cai, Shuangquan Huang, Pete Hollingsworth, Kangshan Mao, Minghui Kang, Yiling Li, Wenlu Yang, Haolin Wu, Yang Chen, Charles C. Davis, Nawal Shrestha, Richard H. Ree, Zhenxiang Xi, Quanjun Hu*, Richard I. Milne*, and Jianquan Liu*. Pervasive hybridization during evolutionary radiation of Rhododendron subgenus Hymenanthes in mountains of southwest China. National Science Review, 9:nwac276 (2022).

Ting Li, Xi Yu, Yumeng Ren, Minghui Kang, Wenjie Yang, Landi Feng, and Quanjun Hu*.The chromosome-level genome assembly of Gentiana dahurica (Gentianaceae) provides insights into gentiopicroside biosynthesis. DNA Research, 29(2):1-10 (2022).

Landi Feng, Hao Lin, Minghui Kang, Yumeng Ren, Xi Yu, Zhanpeng Xu, Shuo Wang, Ting Li, Wenjie Yang, and Quanjun Hu*. A chromosome-level genome assembly of an alpine plant Crucihimalaya lasiocarpa provides insights into high-altitude adaptation DNA Research, 29(1):1-11 (2022).

Wenjie Yang, Landi Feng, Pengfei Jiao, Ling Xiang, Luobai Yang, Marina V. Olonova, Victor V. Chepinoga, Ihsan A. Al-Shehbaz, Jianquan Liu*, Quanjun Hu*. Out of the Qinghai-Tibet plateau: Genomic biogeography of the alpine monospecific genus Megadenia (Biscutelleae, Brassicaceae). Molecular Ecology, 32(2): 492-503 (2022).

Quanjun Hu#, Yazhen Ma#, Terezie Mandakova#, Sheng Shi, Chunlin Chen, Pengchuan Sun, Lei Zhang, Landi Feng, Yudan Zheng, Xiaoqin Feng, Wenjie Yang, Jiebei Jiang, Ting Li, Pingping Zhou, Qiushi Yu, Dongshi Wan, Martin A. Lysak, Zhenxiang Xi*, Eviatar Nevo*, Jianquan Liu*.Genome evolution of the psammophyte Pugionium for desert adaptation and further speciation, Proceedings of the National Academy of Sciences of the United States of America, 118(42):e2025711118 (2021).

Zefu Wang#, Yuanzhong Jiang#, Hao Bi#, Zhiqiang Lu#, Yazhen Ma, Xiaoyue Yang, Ningning Chen, Bin Tian, Bingbing Liu, Xingxing Mao, Tao Ma, Stephen P. DiFazio, Quanjun Hu*, Richard J. Abbott* and Jianquan Liu*. Hybrid speciation via inheritance of alternate alleles of parental isolating genes. Molecular Plant, 14: 208-222 (2021).

Wenjie Yang#, Lei Zhang#, Terezie Mandáková, Li Huang, Ting Li, Jiebei Jiang, Yongzhi Yang, Martin A. Lysak, Jianquan Liu, Quanjun Hu*. The chromosome-level genome sequence and karyotypic evolution of Megadenia pygmaea (Brassicaceae). Molecular Ecology Resources, 21(3): 871-879 (2021).

Chunlin Chen, Wenjie Yang, Jianquan Liu, Zhenxiang Xi, Lei Zhang, Quanjun Hu*. Population transcriptomes reveals gene flow and introgression between two non-sister alpine gentians. Frontiers in Ecology and Evolution, 9:638230 (2021).

Li Huang#, Yazhen Ma#, Jiebei Jiang, Ting Li, Wenjie Yang, Lei Zhang, Lei Wu, Landi Feng, Zhenxiang Xi, Xiaoting Xu, Jianquan Liu, Quanjun Hu*. A chromosome-scale reference genome of Lobularia maritima, an ornamental plant with high stress tolerance. Horticulture Research, 7: 197 (2020).

Linling Zhong#, Huanhuan Liu,# Dafu Ru, Huan Hu, Quanjun Hu*. Population genomic evidence for radiative divergence of four Orychophragmus (Brassicaceae) species in eastern Asia. Botanical Journal of the Linnean Society, 191(1):18-29 (2019).

Yazhen Ma#, Ji Wang#, Quanjun Hu#, Jialiang Li, Yongshuai Sun, Lei Zhang, Richard J. Abbott, Jianquan Liu*, Kangshan Mao*. Ancient introgression drives adaptation to cooler and drier mountain habitats in a cypress species complex. Communications Biology, 2(1):213 (2019).

Tianjing Wang, Dafu Ru, Dan Zhang, Quanjun Hu*. Analyses of genome‐scale variation reveal divergence of two Sinalliaria species (Brassicaceae) with continuous but limited gene flow. Journal of Systematics and Evolution, 57(3):268-277 (2018).

Lei Zhang#, Tingting Zeng#, Huan Hu, Liqiang Fan, Honglei Zheng, Quanjun Hu*.  Interspecific divergence of two Sinalliaria (Brassicaceae) species in eastern China. Frontiers in Plant Science, 9:77 (2018).

Xiaojuan Wang#, Quanjun Hu#, Xinyi Guo, Kun Wang, Dafu Ru, Dmitry A. German, Elizabeth A. Weretilnyk, Richard J. Abbott, Martin Lascoux, Jianquan Liu*.Demographic expansion and genetic load of the halophyte model plant Eutrema salsugineum. Molecular Ecology, 27(14):2943-2955 (2018).

Xinyi Guo#, Quanjun Hu#, Guoqian Hao, Xiaojuan Wang, Dan Zhang, Tao Ma, Jianquan Liu*. The genomes of two Eutrema species provide insight into plant adaptation to high altitudes. DNA Research, 25(3):307-315 (2018).

Tao Ma#, Kun Wang#, Quanjun Hu#, Zhenxiang Xi#, Dongshi Wan, Qian Wang, Jianju Feng, Dechun Jiang, Hamid Ahani, Richard J. Abbott, Martin Lascoux, Eviatar Nevo*, Jianquan Liu*. Ancient polymorphisms and divergence hitchhiking contribute to genomic islands of divergence within a poplar species complex. Proceedings of the National Academy of Sciences, 115(2):E236-E243 (2017).

Xin Luo#, Quanjun Hu#, Pingping Zhou, Dan Zhang, Qian Wang, Richard J. Abbott, Jianquan Liu*. Chasing ghosts: allopolyploid origin of Oxyria sinensis (Polygonaceae) from its only diploid congener and an unknown ancestor. Molecular Ecology, 26(11):3037-3049 (2017).

Huan Hu#, Quanjun Hu#, Ihsan A. Al-Shehbaz, Xin Luo, Tingting Zeng, Xinyi Guo, Jianquan Liu*. Species delimitation and interspecific relationships of the genus Orychophragmus (Brassicaceae) inferred from whole chloroplast genomes. Frontiers in Plant Science, 7:1826 (2016).

Yazhen Ma#, Ting Xu#, Dongshi Wan#, Tao Ma, Sheng Shi, Jianquan Liu, Quanjun Hu*. The salinity tolerant poplar database (STPD): a comprehensive database for studying tree salt-tolerant adaption and poplar genomics. BMC Genomics, 16(1):205 (2015).

Xiaogang Dai#, Quanjun Hu#, Qingle Cai#, Kai Feng#, Ning Ye#, Gerald A. Tuskan#, Richard Milne, Yingnan Chen, Zhibing Wan, Zefu Wang, Wenchun Luo, Kun Wang, Dongshi Wan, Mingxiu Wang, Jun Wang*, Jianquan Liu*, Tongming Yin*.The willow genome and divergent evolution from poplar after the common genome duplication. Cell Research, 24(10):1274-1277 (2014).

Quanjun Hu, Tao Ma, Kun Wang, Ting Xu, Jianquan Liu and Qiang Qiu*.The Yak genome database: an integrative database for studying yak biology and high-altitude adaption. BMC Genomics, 13:600 (2012).